Adversarial Unsupervised Representation Learning for Activity Time-Series

Sufficient physical activity and restful sleep play a major role in the prevention and cure of many chronic conditions. Being able to proactively screen and monitor such chronic conditions would be a big step forward for overall health. The rapid increase in the popularity of wearable devices provides a significant new source, making it possible to track the user's lifestyle real-time. In this paper, we propose a novel unsupervised representation learning technique called activity2vec that learns and "summarizes" the discrete-valued activity time-series. It learns the representations with three components: (i) the co-occurrence and magnitude of the activity levels in a time-segment, (ii) neighboring context of the time-segment, and (iii) promoting subject-invariance with adversarial training. We evaluate our method on four disorder prediction tasks using linear classifiers. Empirical evaluation demonstrates that our proposed method scales and performs better than many strong baselines. The adversarial regime helps improve the generalizability of our representations by promoting subject invariant features. We also show that using the representations at the level of a day works the best since human activity is structured in terms of daily routinesComment: Accepted at AAAI'19. arXiv admin note: text overlap with arXiv:1712.0952

Embarrassingly Simple MixUp for Time-series

Labeling time series data is an expensive task because of domain expertise and dynamic nature of the data. Hence, we often have to deal with limited labeled data settings. Data augmentation techniques have been successfully deployed in domains like computer vision to exploit the use of existing labeled data. We adapt one of the most commonly used technique called MixUp, in the time series domain. Our proposed, MixUp++ and LatentMixUp++, use simple modifications to perform interpolation in raw time series and classification model's latent space, respectively. We also extend these methods with semi-supervised learning to exploit unlabeled data. We observe significant improvements of 1\% - 15\% on time series classification on two public datasets, for both low labeled data as well as high labeled data regimes, with LatentMixUp++

Filling out the missing gaps: Time Series Imputation with Semi-Supervised Learning

Missing data in time series is a challenging issue affecting time series analysis. Missing data occurs due to problems like data drops or sensor malfunctioning. Imputation methods are used to fill in these values, with quality of imputation having a significant impact on downstream tasks like classification. In this work, we propose a semi-supervised imputation method, ST-Impute, that uses both unlabeled data along with downstream task's labeled data. ST-Impute is based on sparse self-attention and trains on tasks that mimic the imputation process. Our results indicate that the proposed method outperforms the existing supervised and unsupervised time series imputation methods measured on the imputation quality as well as on the downstream tasks ingesting imputed time series

Efficient Continual Pre-training for Building Domain Specific Large Language Models

Large language models (LLMs) have demonstrated remarkable open-domain capabilities. Traditionally, LLMs tailored for a domain are trained from scratch to excel at handling domain-specific tasks. In this work, we explore an alternative strategy of continual pre-training as a means to develop domain-specific LLMs. We introduce FinPythia-6.9B, developed through domain-adaptive continual pre-training on the financial domain. Continual pre-trained FinPythia showcases consistent improvements on financial tasks over the original foundational model. We further explore simple but effective data selection strategies for continual pre-training. Our data selection strategies outperforms vanilla continual pre-training's performance with just 10% of corpus size and cost, without any degradation on open-domain standard tasks. Our work proposes an alternative solution to building domain-specific LLMs from scratch in a cost-effective manner

Using Clinical Notes with Time Series Data for ICU Management

Monitoring patients in ICU is a challenging and high-cost task. Hence, predicting the condition of patients during their ICU stay can help provide better acute care and plan the hospital's resources. There has been continuous progress in machine learning research for ICU management, and most of this work has focused on using time series signals recorded by ICU instruments. In our work, we show that adding clinical notes as another modality improves the performance of the model for three benchmark tasks: in-hospital mortality prediction, modeling decompensation, and length of stay forecasting that play an important role in ICU management. While the time-series data is measured at regular intervals, doctor notes are charted at irregular times, making it challenging to model them together. We propose a method to model them jointly, achieving considerable improvement across benchmark tasks over baseline time-series model. Our implementation can be found at \url{https://github.com/kaggarwal/ClinicalNotesICU}.Comment: Accepted at EMNLP 201